Hi, When I ran this

java -jar /hpf/tools/centos6/picard-tools/2.5.0/picard.jar SortVcf SD=genome.dict I=new.vcf o=Newdbsnp.vcf

it shows:

[rzeng@qlogin4 reference]$ [Sat Aug 06 18:02:21 EDT 2016] picard.vcf.SortVcf INPUT=[new.vcf] OUTPUT=Newdbsnp.vcf SEQUENCE_DICTIONARY=genome.dict VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=true CREATE_MD5_FILE=false GA4GH_CLIENT_SECRETS=client_secrets.json
[Sat Aug 06 18:02:21 EDT 2016] Executing as rzeng@qlogin4 on Linux 2.6.32-642.el6.x86_64 amd64; Java HotSpot(TM) 64-Bit Server VM 1.8.0_91-b14; Picard version: 2.5.0(2c370988aefe41f579920c8a6a678a201c5261c1_1466708365)
[Sat Aug 06 18:02:21 EDT 2016] picard.vcf.SortVcf done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=2027945984
To get help, see http://broadinstitute.github.io/picard/index.html#GettingHelp
Exception in thread "main" java.lang.IllegalArgumentException: java.lang.AssertionError: SAM dictionaries are not the same: SAMSequenceRecord(name=chr1,length=195471971,dict_index=0,assembly=null) was found when SAMSequenceRecord(name=chr10,length=130694993,dict_index=0,assembly=null) was expected.
at picard.vcf.SortVcf.collectFileReadersAndHeaders(SortVcf.java:126)
at picard.vcf.SortVcf.doWork(SortVcf.java:95)
at picard.cmdline.CommandLineProgram.instanceMain(CommandLineProgram.java:208)
at picard.cmdline.PicardCommandLine.instanceMain(PicardCommandLine.java:95)
at picard.cmdline.PicardCommandLine.main(PicardCommandLine.java:105)
Caused by: java.lang.AssertionError: SAM dictionaries are not the same: SAMSequenceRecord(name=chr1,length=195471971,dict_index=0,assembly=null) was found when SAMSequenceRecord(name=chr10,length=130694993,dict_index=0,assembly=null) was expected.
at htsjdk.samtools.SAMSequenceDictionary.assertSameDictionary(SAMSequenceDictionary.java:166)
at picard.vcf.SortVcf.collectFileReadersAndHeaders(SortVcf.java:124)
... 4 more

[1]+ Exit 1 java -jar /hpf/tools/centos6/picard-tools/2.5.0/picard.jar SortVcf SD=genome.dict I=new.vcf o=Newdbsnp.vcf

My computer has 70GB vmem capacity. It should not be killed because of computer. Did i miss something?

Thanks for a help!