Question regarding CalculateContamination(GATK/4.1.2.0):
With CalculateContamination in tumor matched mode, I get:
contamination error
NaN 1.0
When I look at the tumor.table and normal. table files generated by Getpileupsummaries, I don't see any unusual data structure/value
What can be the problem?
With CalculateContamination in tumor matched mode, I get:
contamination error
NaN 1.0
When I look at the tumor.table and normal. table files generated by Getpileupsummaries, I don't see any unusual data structure/value
What can be the problem?