Hi, I am trying to use "ASEReadCounter" and have one question regarding "--sitesvcf" option.
For vcf file, I used the individual data and got only several lines as results (less than I expected).
I wonder.. would the result be different if I use "multi-sample vcf" or "genomic vcf" instead of individual vcf, since there should be more lines in these files?
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ASEReadCounter
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