The command I'm running:
spark-submit $JAR gatk-package-4.alpha.2-1147-g1477e1c-SNAPSHOT-local.jar PrintReadsSpark \
-I gs://mybucket/newbam.sort.bam \
-O gs://mybucket/outputfinalspark.bam
The error:
A USER ERROR has occurred: Couldn't write file gs://mybucket/outputfinalspark.bam because writing failed with exception mybucket/outputfinalspark.bam.parts
This has been happening with every jar file
Thanks!