Quantcast
Channel: Recent Discussions — GATK-Forum
Viewing all articles
Browse latest Browse all 12345

Read Groups without known barcodes

$
0
0

Dear all,

I am working with some barley accessions but the barcodes for the samples are not known (not publicly available). However, because the addition of the read groups is a prerequisite for BQSR and HaplotypeCaller, I wonder if I can I use the AddOrReplaceReadGroups command by substituting the barcodes with Ns? RGPU=NNNNNNNN-NNNNNNNN? Thank you in advance.


Viewing all articles
Browse latest Browse all 12345

Trending Articles



<script src="https://jsc.adskeeper.com/r/s/rssing.com.1596347.js" async> </script>