HI,
I was curious if it possible to convert the output of CombineVariants back into individual sample vcf files. Based on answered questions in other threads, I am under the impression that you should not try to use VariantFiltration on a combined output if variants were not called on an previously merged file. Is that correct? If so, could I basically reverse CombineVariants after using SelectVariants to analyze samples individually?
Also, I would like to point out that that all the links to the "Tools documentation index" are broken and displaying 404. I am not if you are aware.
Thank you