Quantcast
Channel: Recent Discussions — GATK-Forum
Viewing all articles
Browse latest Browse all 12345

Different file sizes ?

$
0
0

Hi GATK team,

I have two questions about file size change. I just want to make sure there is no wrong in my pipeline.
Our cluster sometimes kills several jobs without error message.

  1. I have recalibrated lots of bam files and their sizes have been enlarged a lot. e.g. the size of a file increased from 3.6G to 6.3G.
  2. then I have done the variants calling. the result gvcf files have very different size, but all of them have variants on 22 CHROMs.

Viewing all articles
Browse latest Browse all 12345

Trending Articles



<script src="https://jsc.adskeeper.com/r/s/rssing.com.1596347.js" async> </script>